Search results for " Inhibitor"

showing 10 items of 3219 documents

Electrostatic complementarity in pseudoreceptor modeling based on drug molecule crystal structures: the case of loxistatin acid (E64c)

2015

After a long history of use as a prototype cysteine protease inhibitor, the crystal structure of loxistatin acid (E64c) is finally determined experimentally using intense synchrotron radiation, providing insight into how the inherent electronic nature of this protease inhibitor molecule determines its biochemical activity. Based on the striking similarity of its intermolecular interactions with those observed in a biological environment, the electrostatic potential of crystalline E64c is used to map the characteristics of a pseudo-enzyme pocket.

010405 organic chemistryChemistryIntermolecular forceGeneral ChemistryCrystal structureBiochemical Activity010402 general chemistry01 natural sciencesCysteine proteaseCatalysisProtease inhibitor (biology)0104 chemical sciencesCrystallographyLoxistatinComplementarity (molecular biology)Materials ChemistrymedicineMoleculemedicine.drugNew Journal of Chemistry
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Protonation of Tyrosine Kinase Inhibitor Lapatinib: A Theoretical and Experimental Study

2019

The protonation process of tyrosine kinase inhibitor lapatinib was studied by means of 1HNMR and UV/Vis spectroscopy joint with the theoretical calculations at DFT and semi-empirical levels. DFT/M06-2X geometries were used to describe and compare the different cationic forms of lapatinib, while ZINDO/S-CI method performed on those geometries allowed for the interpretation of experimental UV/Vis spectra of lapatinib at various pH. We found that at low pH two different dicationic forms (N2N1 and N1N3) of lapatinib were present in ethanol and DMSO-d6 solutions. The first protonation, however, occurred on the aliphatic N1 in DMSO-d6, while in ethanol solutions most probably the quinazoline nitr…

010405 organic chemistryChemistryStereochemistrymedicine.drug_classMechanical EngineeringProtonationNuclear magnetic resonance spectroscopy010402 general chemistryLapatinib01 natural sciencesTyrosine-kinase inhibitor0104 chemical sciencesUltraviolet visible spectroscopyMechanics of MaterialsmedicineGeneral Materials Sciencemedicine.drugKey Engineering Materials
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Effect of different concentrations of specific inhibitor of matrix metalloproteinases on the shear bond strength of self-adhesive resin cements to de…

2017

Background Considering the probability of chemical and enzymatic reactions between matrix metalloproteinases (MMPs) in the dentin structure and their specific inhibitors, the aim of the present study was to evaluate the effect of different concentrations of specific inhibitor of MMPs (galardin) on the shear bond strength of self-adhesive resin cements to dentin. Material and Methods Forty-eight sound human premolars were mounted in self-cured acrylic resin after removal of the enamel on the buccal and lingual surfaces. The dentin surfaces achieved were polished and prepared with 600-grit silicon carbide paper. The samples were divided into 3 groups (n=16) based on the concentration of galar…

010407 polymersMatrix metalloproteinase inhibitorComposite numberDentistryDental bondingMatrix metalloproteinase01 natural sciencesOperative Dentistry and Endodontics03 medical and health sciences0302 clinical medicinestomatognathic systemDentinmedicineComposite materialGeneral DentistryAcrylic resinEnamel paintbusiness.industryChemistryResearch030206 dentistry:CIENCIAS MÉDICAS [UNESCO]0104 chemical sciencesstomatognathic diseasesmedicine.anatomical_structureDistilled watervisual_artUNESCO::CIENCIAS MÉDICASvisual_art.visual_art_mediumbusiness
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Two maize Kip-related proteins differentially interact with, inhibit and are phosphorylated by cyclin D–cyclin-dependent kinase complexes

2017

Highlight Maize Kip-related proteins can be differentially phosphorylated by different cyclin D–cyclin-dependent kinase complexes and this influences their performance as cyclin-dependent kinase inhibitors.

0106 biological sciences0301 basic medicineCDKsPhysiologyCyclin DPlant Developmental BiologyPlant ScienceZea mays01 natural scienceslaw.inventionCyclins D03 medical and health sciencesGene Expression Regulation PlantCyclin-dependent kinaselawCyclin DPhosphorylationKinase activityKinase inhibitionCyclin-Dependent Kinase Inhibitor ProteinsPlant ProteinsbiologyKinaseKRP phosphorylationfood and beveragesICK/KRPsCyclin-Dependent Kinases030104 developmental biologyZea mays.Biochemistrybiology.proteinCyclin-dependent kinase complexRecombinant DNAPhosphorylationResearch Paper010606 plant biology & botanyCyclin-dependent kinase inhibitor proteinJournal of Experimental Botany
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Phosphinotripeptidic Inhibitors of Leucylaminopeptidases

2021

Phosphinate pseudopeptide are analogs of peptides containing phosphinate moiety in a place of the amide bond. Due to this, the organophosphorus fragment resembles the tetrahedral transition state of the amide bond hydrolysis. Additionally, it is also capable of coordinating metal ions, for example, zinc or magnesium ions. These two properties of phosphinate pseudopeptides make them an ideal candidate for metal-related protease inhibitors. This research investigates the influence of additional residue in the P2 position on the inhibitory properties of phosphinopeptides. The synthetic strategy is proposed, based on retrosynthetic analysis. The N-C-P bond formation in the desired compounds is …

0106 biological sciences0301 basic medicineModels MolecularMolecular modelQH301-705.5StereochemistryPhosphinesProtein ConformationSwineLAP inhibitorsligand-enzyme interactionPhosphinate01 natural sciencesAminopeptidaseCatalysisArticleInorganic Chemistry03 medical and health sciencesResidue (chemistry)phosphinate pseudopeptideLeucyl AminopeptidaseMoietyPeptide bondAnimalsBiology (General)Physical and Theoretical ChemistryEnzyme InhibitorsQD1-999Molecular BiologyMagnesium ionmolecular modeling; LAP inhibitors; barley aminopeptidase inhibitor; phosphinate pseudopeptide; ligand-enzyme interaction; organophosphorus compoundSpectroscopyChemistrymolecular modelingOrganic ChemistryGeneral Medicineorganophosphorus compoundPeptide FragmentsComputer Science ApplicationsChemistry030104 developmental biologybarley aminopeptidase inhibitorHordeum vulgare010606 plant biology & botanyInternational Journal of Molecular Sciences; Volume 22; Issue 10; Pages: 5090
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Oxylipin mediated stress response of a miraculin-like protease inhibitor in Hexanoic acid primed eggplant plants infested by Colorado potato beetle

2017

Insect-plant interactions are governed by a complex equilibrium between the mechanisms through which plant recognize insect attack and orchestrate downstream signaling events that trigger plant defense responses, and the mechanisms by which insects overcome plant defenses. Due to this tight and dynamic interplay, insight into the nature of the plant defense response can be gained by analyzing changes in the insect herbivores digestive system upon plant feeding. In this work we have identified a Solanum melongena miraculin-like protease inhibitor in the midgut juice of Colorado potato larvae feeding on eggplant plants treated with the natural inducer of plant defenses hexanoic acid. We analy…

0106 biological sciences0301 basic medicinePhysiologyMiraculinPlant ScienceEggplant01 natural sciences03 medical and health scienceschemistry.chemical_compoundGene Expression Regulation PlantBotanyPlant defense against herbivoryAnimalsColorado potato beetleProtease InhibitorsOxylipinsSolanum melongenaCaproatesMiraculin-like proteinHexanoic acidbiologyColorado potato beetlefungiPlant physiologyfood and beveragesOxylipinbiology.organism_classificationCell biologyColeoptera030104 developmental biologychemistryDefense primingSolanumHexanoic acidAgronomy and Crop ScienceSolanaceae010606 plant biology & botany
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Antifungal and antimycotoxigenic activity of hydrolyzed goat whey on Penicillium spp: An application as biopreservation agent in pita bread

2020

Abstract Whey is a by-product of the cheese industry, yet it contains proteins that have a high nutritional value and are an important source of antifungal peptides. Food deterioration caused by toxigenic fungi is one of the challenges of food safety. In this context, trypsin was used to hydrolyse goat milk whey at 37. The resultant peptides were characterised by LC–ESI–TOF-MS. Antifungal activity of the goat milk whey hydrolysate (HGW) was determined against 10 toxigenic fungi from the genus Penicillium, in solid and liquid media. Furthermore, HGW was used as an ingredient for bread elaboration. Bread elaborated with HGW and inoculated with toxigenic fungi was included in a shelf-life stud…

0106 biological sciencesContext (language use)01 natural sciencesHydrolysateAntifungal peptideBioactive peptideMinimum inhibitory concentrationchemistry.chemical_compoundIngredient0404 agricultural biotechnology010608 biotechnologyWheyFood scienceMycotoxinchemistry.chemical_classificationbiologyShelf-lifedigestive oral and skin physiologyfood and beverages04 agricultural and veterinary sciencesBiopreservationbiology.organism_classificationToxigenic fungi040401 food sciencechemistryPenicilliumPropionateFood Science
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Applicability of a single‐use bioreactor compared to a glass bioreactor for the fermentation of filamentous fungi and evaluation of the reproducibili…

2021

Abstract The implementation of single‐use technologies offers several major advantages, e.g. prevention of cross‐contamination, especially when spore‐forming microorganisms are present. This study investigated the application of a single‐use bioreactor in batch fermentation of filamentous fungus Penicillium sp. (IBWF 040‐09) from the Institute of Biotechnology and Drug Research (IBWF), which is capable of intracellular production of a protease inhibitor against parasitic proteases as a secondary metabolite. Several modifications to the SU bioreactor were suggested in this study to allow the fermentation in which the fungus forms pellets. Simultaneously, fermentations in conventional glass b…

0106 biological sciencesEnvironmental Engineeringsingle‐use bioreactorMicroorganismPenicillium spBioengineeringSecondary metabolite01 natural sciencesprotease inhibitor03 medical and health sciences010608 biotechnologyPelletmedicineBioreactorFood sciencefermentationResearch Articles030304 developmental biology0303 health sciencesbiologyChemistrytechnology industry and agricultureSubstrate (chemistry)biology.organism_classificationequipment and suppliespelletsSingle-use bioreactorPenicilliumFermentationTP248.13-248.65Biotechnologymedicine.drugResearch ArticleEngineering in Life Sciences
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Wild

2021

Graphical abstract

0106 biological sciencesGermplasmPhytochemistryTPCC total phenolic contentElderberry flowerISSR inter-simple sequence repeatElderberry fruitIC50 the half maximal inhibitory concentrationBerrySambucus nigra01 natural sciencesArticleTFC total flavonoid contentDW dry weightSARS-CoV2 severe acute respiratory syndrome coronavirus 2Rutinchemistry.chemical_compoundBotanyELISA enzyme linked immunosorbent assayCultivarAntiviralComputingMethodologies_COMPUTERGRAPHICSGenetic diversityACE2 angiotensin converting enzyme 2biology010405 organic chemistryPVPP polyvinylpyrrolidoneSambucus nigra L.biology.organism_classification0104 chemical scienceschemistryHPLC high-performance liquid chromatographyTEAC trolox equivalent anti-radical capacityGene poolAgronomy and Crop Science010606 plant biology & botanyBinding domainIndustrial crops and products
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Functional and Pharmacological Analyses of the Role of Penicillium digitatum Proteases on Virulence

2019

© The Author(s).

0106 biological sciencesMicrobiology (medical)ProteasesMetallopeptidasefruit–fungal interactionmedicine.medical_treatmentprotease inhibitorsVirulence<i>Agrobacterium tumefaciens</i> mediated transformation01 natural sciencesMicrobiologyArticleMicrobiology03 medical and health sciencesVirologyGene expressionmedicineMetalloprotease inhibitorMetal ion chelatorsPathogenlcsh:QH301-705.5transcription factor030304 developmental biologymetal ion chelators0303 health sciencesPenicillium digitatumProteasebiologyVirulencemicrobiologyfood and beveragescitrus fruitProtease inhibitorsbiology.organism_classificationvirulenceFruit–fungal interactionlcsh:Biology (General)Agrobacterium tumefaciens mediated transformationTranscription factorCitrus fruit010606 plant biology & botanyMicroorganisms
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